I found the wiki site very useful.
Note the stages that are listed on the left hand column of the main quests and then relate them to the stage that is stated in the side quests. Take care to to the side missions as soon as they become available, don't miss any or it can affect one or more quests later in the game.
If there's choice in a quest make sure to check the guide to see the outcome of choices, most don't matter so much but some can block later quests.
Simply click on the quest name to open up more detail on it.
Feel free to comment any suggestions