Here is a 2 part video guide I used to help me out on my Xbox 360 version of getting this trophy/achievement.
Please be sure to note that some of the eBooks can be had much easier if you have chosen to equip Jensen with both the Hacking: Capture Level 5 and Punch through Wall Arm Augmentation. There is also one eBook located in Tai Yong Medical that can only be accessed if you have purchased the Icarus Landing System Augmentation.