This is the bestiary list from the in-game tome, which shows most of the monsters in the game. Some monsters do not appear in the bestiary (and do not count for bestiary completion) so they aren't shown here either. I've added the locations of each monster so you can track down any you missed, along with noting which ones are missable. For regular monsters, I list both the story related dungeons and timed dungeons they appear in. You cannot go back to story dungeons, so if you're missing a monster, check one of the timed dungeons listed. Story bosses are listed merely as story bosses, since they cannot be missed. Bosses that appear in timed dungeons show the quest they are found in, and the landmass the quest occurs on.
The good news is that in the process of finishing all the side dungeons and doing the story, you'll get the vast majority of these. After doing everything I only had a few monsters that took any effort to track down. I'll note here as well that some monsters seem to show up more often when using monster call, and some show up more often during random encounters, so if a monster isn't showing up, try both. You can also try getting into encounters in dead ends to see if that helps. It did once or twice for me.
Due to the nature of the bestiary, there'll be some minor spoilers here due to boss names. Bear in mind the missable monsters are highlighted in the actual walkthrough, so you can check this after you finish the story to avoid spoilers of any kind.
Vorpal
Dis Snow Forest:Forest to Entremets (Story)
Sealed Ruin:Lower Level (Timed-Lowee)
Virpal
Dis Snow Forest:Suspicious Forest (Story)
Dis Snow Forest:Guild Extremist City (Story)
Dis Snow Forest:Floor 1 (Timed-Lowee)
Varpal
Dis Snow Forest:Forest in Snow (Story)
Dis Snow Forest:Floor 2 (Timed-Lowee)
Vurpal
Dis Snow Forest:Floor 3 (Timed-Lowee)
Gorbash
Remnant Tower:Monster Tower (Story)
Sealed Ruin:Lower Level (Timed-Leanbox)
Windy Wasteland:Dark God's Cave (Timed-Lastation)
Arch Lindworm
Sealed Ruin:Closed Holy Ground (Story-Lowee)
Sealed Ruin:Closed Holy Ground (Story-Leanbox)
Schooner TYPE-AL:Middle Level (Timed- Lowee)
Lindwurm
Story Boss
Tyrant
Stella Mines:Dark Mine (Story)
Stella Mines:Lower Level (Timed-Leanbox)
Golgos
Stella Mines:Near the Entrance (Timed-Leanbox)
Imp
Evil Cave:Cave Near Town (Story)
Evil Cave:Suspicious Cave (Story)
Sealed Ruin:Lower Level (Timed-Planeptune)
Neo-Geo Front:Sector 1 (Timed-Planeptune)
Evil Cave:Center (Timed-Planeptune)
Big Eye
Convent:Danger Zone (Timed-Lowee)
Devil's Pupil
Stella Mines:Abandoned Mine (Story)
Stella Mines:Middle Level (Timed-Leanbox)
Sealed Ruin:Middle Level (Timed-Leanbox)
Revenant *MISSABLE*
Bruagga Tower:Invaded Tower (Story)
Nebiros *MISSABLE*
Bruagga Tower:Inside a Disc (Story)
Clione
Clione
Clione
Clione
Clione
Clione
Clione
These all have the same appearance, only way to tell them apart is how much experience they give. There's no indication in the bestiary of which ones you could be missing since it doesn't show any stats on the monsters in the bestiary.
Hornet
Windy Wasteland:Den by Merchant Way (Story)
Remnant Tower:Monster Tower (Story)
Sealed Ruin:Lower Level (Timed-Lastation)
Killer Bee
Maado Forest:Old Trading Way (Story)
Hirool Castle:F1 (Timed-Leanbox)
Stella Mines:Near Entrance (Timed-Leanbox)
Sealed Ruin:Middle Level (Timed-Leanbox)
Death Hornet
Sealed Ruin:Closed Holy Ground in Lastation (Story)
Sealed Ruin:Upper Level (Timed-Planeptune)
Sealed Ruin:Upper Level (Timed-Lastation)
Army Bee
Sealed Ruin:Goddess Ruins (Story)
Sealed Ruin:Deep End (Timed-Planeptune)
Devilish Bee
Evil Cave:Old Mining Area (Story)
Challenge Cave:To Wasteland (Story)
Dis Snow Forest:Floor 3 (Timed-Lowee)
King Crab
Pirate Ship FX:Near the Entrance (Timed-Lowee)
Demonic Crab
Dis Snow Forest:Guild Extremist City (Story)
Dis Snow Forest:Supicious Forest (Story)
Dis Snow Forest:Floor 2 (Timed=Lowee)
Jaki
Evil Cave:Cave Near Town (Story)
Evil Cave:Suspicious Cave (Story)
Sealed Ruin:Lower Level (Timed-Planeptune)
Evil Cave:Near the Entrance (Timed-Planeptune)
Evil Cave:Center (Timed-Planeptune)
Yeti
Bruagga Tower:Infested Tower (Story)
Bruagga Tower:Lower Level (Timed-Lowee)
Troll
Story Boss
Ogre *MISSABLE*
Dis Snow Forest:Big Forest's Edge (Story)
Cyclops
Challenge Cave:Heretic's Cave (Story)
Windy Wasteland:Wasteland's Vent (Timed-Lastation)
Botroll
Evil Cave:Center (Timed-Planeptune)
Dark Assassin
Convent:Danger Zone (Timed-Lowee)
Fenrir
Maado Forest:Old Trading Way (Story)
Stella Mines:Abandoned Mine (Story)
Hirool Castle:F1 (Timed-Leanbox)
Hot Dog
Story Boss
Ice Fenrir *MISSABLE*
Dis Snow Forest:Monster Forest (Story)
Behemoth *MISSABLE*
Maado Forest:Hero Shrine's Forest (Story)
Blue Shadow
Timed Dungeon Boss (Speedy Blue Shadow-Planeptune)
Golden Dog
Sealed Ruin:Deep End (Timed-Lowee)
Pirate Ship FX:Deep End (Timed-Lowee)
Stray Dog
Timed Dungeon Boss (Doggy Delusion-Lastation)
Roc
Story Boss
Garuda *MISSABLE*
Remnant Tower:Abandoned Tower (Story)
Concord
Bruagga Tower:Infested Tower (Story)
Bruagga Tower:Lower Level (Timed-Lowee)
Hraesvelgr
Bruagga Tower:Invaded Tower (Story)
Griffon *MISSABLE*
Maado Forest:Hero Shrine's Forest (Story)
Gyps
Stella Mines:Closed Sector (Timed-Leanbox)
Norma Tower:Floor 3 (Timed-Leanbox)
Norma Tower:Floor 4 (Timed-Leanbox)
Sub Griffon
Timed Dungeon Boss (Griffon Hunting-Leanbox)
Rare Griffon
Timed Dungeon Boss (Griffon Hunting 2-Leanbox)
Gyuki
Challenge Cave:Ghost Mine (Story)
Challenge Cave:Abandoned Mine (Story)
Challenge Cave:Den by the Railroad (Story)
Hirool Castle:Suspicious Old Castle (Story)
Convent:Pathway to Entremets (Story)
Maado Forest:Entrance (Timed-Leanbox)
Mega Storage 3:Data Storage 1 (Timed-Lastation)
Minotaur
Dis Snow Forest:Floor 1 (Timed-Lowee)
Convent:Near the Entrance (Timed-Lowee)
Convent:Middle Level (Timed-Lowee)
Kuyutha
Challenge Cave:To Wasteland (Story)
Challenge Cave:Kutegori's Cave (Story)
Convent:Dragon's Nest (Timed-Lowee)
Wyvern
Dis Snow Forest:Guild Extremist City (Story)
Dis Snow Forest:Floor 1 (Timed-Lowee)
Dragon
Challenge Cave:Heretic's Cave (Story)
Stella Mines:Dark Mine (Story)
Stella Mines:Lower Level (Timed-Leanbox)
Mist Dragon
Stella Mines:Old Trading Way (Story)
Challenge Cave:Middle Level (Timed-Lastation)
Dragon Zombie
Celestial Path:Last Dungeon (Story)
Hirool Castle:F4 (Timed-Leanbox)
Celestial Path:Hero's Road (Timed-Leanbox)
Sealed Ruin:Upper Danger Zone (Timed-Lastation)
Guardragon
Timed Dungeon Boss (Dragon, Baby-Lowee)
Golem
Stella Mines:Abandoned Mine (Story)
Hirool Castle:F2 (Timed-Leanbox)
Stella Mines:Middle Level (Timed-Leanbox)
Steel Golem
Dis Snow Forest:Floor 2 (Timed-Lowee)
Magitek Soldier
Sealed Ruin:Closed Holy Ground in Lastation (Story)
Sealed Ruin:Upper Level (Timed-Lastation)
Master Golem
Celestial Path:Last Dungeon (Story)
Celestial Path:Heros' Road (Timed-Planeptune)
Soldier
Sealed Ruin:Deep End (Timed-Lowee)
Pirate Ship FX:Deep End (Timed-Lowee)
Guard
Timed Dungeon Boss (Sleeping Statue-Leanbox)
Chimera *MISSABLE*
Challenge Cave:Abandoned Mine (Story)
Challenge Cave:Den by the Railroad (Story)
Peryton
Challenge Cave:Heretic's Cave (Story)
Hirool Castle:Aristocrat Mansion (Story)
Hirool Castle 3 (Timed-Leanbox)
Sealed Ruin:Upper Level (Timed-Leanbox)
Windy Wasteland:Wasteland's Vent (Timed-Lastation)
Manticore *MISSABLE*
Norma Tower:Goddess-Only Path (Story)
Tania
Stella Mines:Dark Mine (Story)
Stella Mines:Lower Level (Timed-Leanbox)
Sealed Ruin:Upper Level (Timed-Leanbox)
Bean Nighe
Bruagga Tower:Invaded Tower (Story)
Stella Mines:Old Trading Way (Story)
Sealed Ruin:Lower Sealed Area (Timed-Lastation)
Challenge Cave:Middle Level (Timed-Lastation)
Tanighe
Celestial Path:Last Dungeon (Story)
Hirool Castle:F4 (Timed-Leanbox)
Stella Mines:Closed Sector (Timed-Leanbox)
Celestial Path:Hero's Road (Timed-Planeptune)
Bean Sidhe *MISSABLE*
Sealed Ruin : Closed Holy Ground - (Lastation)
Banshee *MISSABLE*
Evil Cave: Old Mining Area (Story)
Leanan Sidhe
Sealed Ruin:Middle Level (Timed-Lowee)
Pirate Ship FX:Deep End (Timed-Lowee)
Lorelei
Timed Dungeon boxx (Singing of Lorelei-Lowee)
Aqua Dragon
Challenge Cave:Evil Nest (Story)
Challenge Cave:Near the Entrance (Timed-Lastation)
Fire Dragon
Stella Mines:Old Trading Way (Story)
Sealed Ruin:Lower Sealed Area (Timed-Lastation)
Shadow Dragon *MISSABLE*
Evil Cave:Old Mining Area (Story)
God Dragon *MISSABLE*
Challenge Cave:Kuterogi's Cave (Story)
Baby Shadow
Timed Dungeon Boss (Way of Faith-Lowee)
Orthrus *MISSABLE*
Challenge Cave:Den by the Railroad (Story)
Challenge Cave:Evil Nest (Story)
Cerberus *MISSABLE*
Sealed Ruin:Closed Holy Ground in Lastation (Story)
Diablos
Bruagga Tower:Inside a Disc (Story)
Sealed Ruin:Upper Level (Timed-Planeptune)
Sealed Ruin:Upper Level (Timed-Lastation)
Challenge Cave:Near the Entrance (Timed-Lastation)
Ouroboros
Stella Mines:Leanbox Cave (Story)
Hirool Castle:F5 (Timed-Leanbox)
Stella Mines:Closed Sector (Timed-Leanbox)
Augustus
Mega Storage 5:Massive Storage 1 (Timed-Lastation)
Demon
Stella Mines:Abandoned Mine (Story)
Hirool Castle:F2 (Timed-Leanbox)
Arch Demon
Sealed Ruin:Closed Holy Ground in Leanbox (Story)
Remnant Tower:Middle Level (Timed-Leanbox)
Sealed Ruin:Deep End (Timed-Leanbox)
Sealed Ruin:Upper Sealed Area (Timed-Leanbox)
Demon Lord *MISSABLE*
Bruagga Tower:Inside a Disc (Story)
Thanatos
Timed Dungeon Boss (World's Labyrinth F. 1-Lowee)
Hell's Lord
Timed Dungeon boss (How Dare You! Noob Goddess!-Lastation)
Ring Dragon
Hirool Castle:Aristocraft Mansion (Story)
Hirool Castle:F3 (Timed-Leanbox)
Sealed Ruin:Upper Level (Timed-Leanbox)
Vile Dragon
Timed Dungeon boss (Accepting Applicants-Leanbox)
Fafnir
Sealed Ruin:Goddess Ruins (Story)
Sealed Ruin:Deep End (Timed-Planeptune)
Nidhogg
Celestial Path:Last Dungeon (Story)
Remnant Tower:Upper Level (Timed-Leanbox)
Celestial Path:Hero's Road (Timed-Planeptune)
Sealed Ruin:Upper Danger Zone (Timed-Lastation)
Challenge Cave:Deep End (Timed-Lastation)
459th Metal Tower Upper Level (Timed-Lastation)
Sealed Ruin:Middle Level (Timed-Lowee)
Bruagga Tower:Upper Level (Timed-Lowee)
Hydra
Norma Tower:Floor 3 (Timed-Leanbox)
Norma Tower:Floor 4 (Timed-Leanbox)
Bahamut
Timed Dungeon boss (Take My Dragon-Leanbox)
Ancient Dragon
Story Boss
Sahuagin
Pirate Ship FX:Near the Entrance (Timed-Lowee)
Remora
Pirate Ship FX:Middle Level (Timed-Lowee)
Sahuagin King
Sealed Ruin:Closed Holy Ground in Lowee (Story)
Schooner TYPE-AL:Near the Entrance (Timed-Lowee)
Pirate Ship FX:Near the Entrance (Timed-Lowee)
Capricorn
Schooner TYPE-AL:Near the Entrance (Timed-Lowee)
Devil Tentacle
Pirate Ship FX:Near the Entrance (Timed-Lowee)
Kraken
Pirate Ship FX:Middle Level (Timed-Lowee)
Dagon
Schooner TYPE-AL:Near the Entrance (Timed-Lowee)
Automatic Cannon
Mega Storage 3:Monster Storage (Story)
Mega Storage 4:Abandoned Storage (Story)
Neo-Geo Front:Sector 3 (Timed-Planeptune)
Mega Storage 5:Massive Storage 2 (Timed-Lastation)
Micro Burst
Mega Storage 4:Abandoned Storage (Story)
Mega Storage 6:HQ Storage (Story)
Neo-Geo Front:Sector 3 (Timed-Planeptune)
Mega Storage 5:Massive Storage 2 (Timed-Lastation)
Wave Cannon
Mega Storage 6:HQ Storage (Story)
Neo-Geo Front:Sector 4 (Timed-Planeptune)
Particle Cannon
Neo-Geo Front:Closed Sector (Timed-Planeptune)
DST-2
Neo-Geo Front:Closed Sector (Timed-Planeptune)
SAA-4
Sealed Ruin:Deep End (Timed-Lowee)
Pirate Ship FX:Deep End (Timed-Lowee)
Gunner *MISSABLE*
Mega Storage 3:Monster Storage (Story)
Titan
Story Boss
Chariot
Hirool Castle:Aristocrat Mansion (Story)
Hirool Castle:F3 (Timed-Leanbox)
Thor
Sealed Ruin:Closed Holy Ground in Leanbox (Story)
Remnant Tower:Middle Level (Timed-Leanbox)
Sealed Ruin:Deep End (Timed-Leanbox)
Sealed Ruin:Upper Sealed Area (Timed-Leanbox)
Dullahan *MISSABLE*
Hirooi Castle:Basilicom Entrance (Story)
Micro Park:Basilicom Entrance (Story)
Nothung
Hirool Castle:F4 (Timed-Leanbox)
Hirool Castle:F5 (Timed-Leanbox)
Remnant Tower:Upper Level (Timed-Leanbox)
Challenge Cave:Deep End (Timed-Lastation)
459th Metal Tower:Upper Level (Timed-Lastation)
Sealed Ruin:Middle Level (Timed-Lowee)
Bruagga Tower:Upper Level (Timed-Lowee)
Kaiser Dragon
Story Boss
Weeping Grass
Challenge Cave:Abandoned Mine (Story)
Hirool Castle:Suspicious Old Castle (Story)
Maado Forest:Herb Forest (Story)
Maado Foest:Entrance (Timed-Leanbox)
Sealed Ruin:Lower Level (Timed-Leanbox)
Mega Storage 3:Data Storage 1 (Timed-Lastation)
Windy Wasteland:Dark God's Cave (Timed-Lastation)
Mandragora
Dis Snow Forest:Guild Extemist City (Story)
Dis Snow Forest:Suspicious Forest (Story)
Stella Mines:Dark Mine (Story)
Sealed Ruin:Upper Level (Timed-Leanbox)
Mega Storage 4:Machine Storage 1 (Timed-Lastation)
Mega Storage 4:Machine Storage 2 (Timed-Lastation)
Dis Snow Forest:Floor 2 (Timed-Lowee)
Demon Vine
Norma Tower:Goddess-Only Path (Story)
Hua-Po
Stella Mines:Leanbox Cave (Story)
Maado Forest:Hero Shrine's Forest (Story)
Neo-Geo Front:Closed Sector (Timed-Planeptune)
Giant Crawfish
Pirate Ship FX: Middle Level (Timed-Lowee)
Knight Crawfish
Schooner TYPE-AL:Near the Entrance (Timed-Lowee)
Slapping Lobster
Sealed Ruin:Lower Level (Timed-Lowee)
Bat
Windy Wasteland:Den by Merchant Way (Story)
Remnant Tower:Monster Tower (Story)
Hirool Castle:Suspicious Old Castle (Story)
Bruagga Tower:Infested Tower (Story)
Maado Forest:Entrace (Timed-Leanbox)
Sealed Ruin:Lower Level (Timed-Leanbox)
Sealed Ruin:Lower Level (Timed-Lastation)
Bruagga Tower:Lower Level (Timed-Lowee)
Vampire Bat *MISSABLE*
Challenge Cave:Abandoned Mine (Story)
Challenge Cave:Den by the Railroad (Story)
Sea Bat
Bruagga Tower:Invaded Tower (Story)
Sealed Ruin:Lower Sealed Area (Timed-Lastation)
Challenge Cave:Middle Level (Timed-Lastation)
Lesser Bat
Sealed Ruin:Closed Holy Ground in Leanbox (Story)
Remnant Tower:Middle Level (Timed-Leanbox)
Sealed Ruin:Deep End (Timed-Lastation)
Sealed Ruin:Upper Sealed Area (Timed-Lastation)
Killer Bat *MISSABLE*
Hirooi Castle:Basilicom Entrance (Story)
Norma Tower:Goddess-Only Path (Story)
Micro Park:Basilicom Entrance (Story)
Killer Rabbit *MISSABLE*
Evil Cave:Suspicious Cave (Story)
Giant Rabbit
Challenge Cave:Evil Nest (Story)
Challenge Cave:Near the Entrance (Timed-Lastation)
Berserker Bunny
Convent:Pathway to Entremets (Story)
Convent:Near the Entrance (Timed-Lowee)
Convent:Middle Level (Timed-Lowee)
Dark Rabbit
Sealed Ruin:Goddess Ruins (Story)
Sealed Ruin:Deep End (Timed-Planeptune)
Serpent *MISSABLE*
Stella Mines:Old Trading Way (Story)
Sea Serpent
Dis Snow Forest:Forest to Entremets (Story)
Sealed Ruin:Lower Level (Timed-Lowee)
Earth Serpent
Hirool Castle:Aristocrat Mansion (Story)
Hirool Castle:F3 (Timed-Leanbox)
Leviathan
Schooner TYPE-AL:Near the Entrance (Timed-Lowee)
Skeleton King
Norma Tower:Goddess-Only Path (Story)
Dis Snow Forest:Floor 3 (Timed-Lowee)
Viper
Convent:Pathway to Entremets (Story)
Convent:Near the Entrance (Timed-Lowee)
Convent:Middle Level (Timed-Lowee)
Hell Viper *MISSABLE*
Mega Storage 3:Monster Storage (Story)
Tsuchinoko
Challenge Cave:Heretic's Cave (Story)
Windy Wasteland:Wasteland's Vent (Timed-Lastation)
Dark Cobra *MISSABLE*
Remnant Tower:Abandoned Tower (Story)
Centaur
Story Boss
Labyrinth
Timed Dungeon Boss (World's Labyrinth F. 2-Lowee)
Valkyrie
Sealed Ruin:Closed Holy Grounf in Leanbox (Story)
Remnant Tower:Middle Level (Timed-Leanbox)
Sealed Ruin:Deep End (Timed-Leanbox)
Sealed Ruin:Upper Sealed Area (Timed-Leanbox)
Brynhildr
Schwertleite
Ortlinde
There are all bosses in the same Timed Dungeon (Three Valkyrie Sisters)
Orochi
Story Boss
Jormungandr
Timed Dungeon Boss (War Against Creation-Lastation)
Mijaguji
Timed Dungeon Boss (For Our Goddess-Lastation)
Tiamat
Story Boss
Typhoeus
Timed Dungeon Boss (Amazing Shrooms-Lowee)
Rabbit *MISSABLE*
Sealed Ruin:Closed Holy Ground in Lowee (Story)
Sand Worm
Story Boss
Grill Worm
Sealed Ruin:Closed Holy Ground in Lowee (Story)
Schooner TYPE-AL:Middle Level (Timed-Lowee)
Rock Worm
Dis Snow Forest:Guild Etremist City (Story)
Dis Snow Forest:Monster Forest (Story)
Convent:Middle Level (Timed-Lowee)
Terrain Worm *MISSABLE*
Challenge Cave:Cave to Wasteland (Story)
Oni
Dis Snow Forest:Big Forest's Edge (Story)
Remnant Tower:Upper Level (Timed-Leanbox)
Daeva *MISSABLE*
Hirooi Castle:Basilicom Entrance (Story)
Micro Park:Basilicom Entrance (Story)
Ariadne *MISSABLE*
Remnant Tower:Abandoned Tower (Story)
Ahriman
Hirool Castle:F5 (Timed-Leanbox)
Mega Storage 6:Garage 1 (Timed-Lastation)
Phoenix
Timed Dungeon Boss (Disastrous Flames-Lastation)
Killachine
Story Boss
Antares
Timed Dungeon Boss (Stargazing Boy-Leanbox)
Deus Ex Machina
Timed Dungeon Boss (From the Dark Underground-Leanbox)
Killachine 1.01
Timed Dungeon Boss (Dear Neptune-Lastation)
Killachine 2.01
Timed Dungeon Boss (Steel Soul-Lastation)
Tadpole
Story Boss
Polliwog
Dis Snow Forest:Forest in Snow (Story)
Bruagga Tower:Upper Level (Timed-Lowee)
Frog Baby
Timed Dungeon Boss (Emergency Request-Lastation)
Pres. Macaroon
Captain Macaroon
Cutesy Macaroon
Macaroon
These are all Timed Dungeon Bosses in the same dungeon (Leanbox Special Forces-Leanbox)
Macaroon
Timed Dungeon Boss (Search for an Employee-Leanbox)
CPU Breaker
Story Boss
CPU Breaker +
Timed Dungeon Boss (Threat Letter-Lastation)
CPU Breaker ++
Timed Dungeon Boss (Steel Soul-Lastation)
Herobo
Roborival
Zeta Herobo
Timed Dungeon Bosses (Lineage of Justice-Planeptune)
Betelgeuse
Timed Dungeon Boss (Worst Machine of the Year-Planeptune)
Ababab
Timed dungeon Boss (Legend of a Hero-Leanbox)
Giant Bull
Story Boss
King Bull
Timed dungeon Boss (Fierce, King of Giant Bulls-Leanbox)
Butterfly *MISSABLE*
Remnant Tower:Abandoned Tower (Story)
Black Swallowtail
Sealed Ruin:Goddess Ruins (Story)
Dis Snow Forest:Big Forest's Edge (Story)
Sealed Ruin:Deep End (Timed-Planeptune)
Peach Swallowtail
Challenge Cave:Kutegori's Cave (Story)
Convent:Dragon's Nest (Timed-Lowee)
Swallowtail
Sealed Ruin:UpperDanger Zone (Timed-Lastation)
Poison Butterfly
Timed Dungeon Boss (Dancing Butterfly-Leanbox)
Guard Vermin
Story Boss
Guard Vermin
Story Boss
King Vermin
Story Boss
Guard Vermin
Story Boss
Guard Vermin
Story Boss
Arfoire *MISSABLE*
This is the final boss of the game if you've recruited less than all 3 goddesses. You MUST recruit less than 3 when finishing the story or you will have to reload a save before you recruited the 3rd, or do another playthrough.
Shiva
Timed Dungeon Boss (Shiva's Visit-Lowee)
True Arfoire
This is the final boss of the game if you've recruited all 3 goddesses. Can also be accessed at any time post-game after recruiting all 3 goddesses by choosing The Last Battle event in Planeptune via the search menu.
Lurian
Timed Dungeon Boss (Reverse Survival-Lowee)
Red Lurian *MISSABLE*
Maado Forest:Hero Shrine's Forest (Story)
Green Lurian *MISSABLE*
Dis Snow Forest:Forest in Snow (Story)
Prism Lurian
Norma Tower:Floor 3 (Timed-Planeptune)
Norma Tower:Floor 4 (Timed-Planeptune)
Mega Storage 6:Garage 1 (Timed-Lastation)
Mega Storage 6:Secret Garage (Timed-Lastation)
Snow Fairy
Timed Dungeon Boss (World's Labyrinth F. 3-Lowee)
Lamp Fish
Pirate Ship FX:Near the Entrance (Timed-Lowee)
Red Fish
Dis Snow Forest:Forest in Snow (Story)
Dis Snow Forest:Big Forest's Edge (Timed-Lowee)
Dis Snow Forest:Floor 3 (Timed-Lowee)
Dendrobium
Dis Snow Forest:Forest to Entremets (Story)
Maado Forest:Herb Forest (Story)
Maado Forest:Entrance (Timed-Leanbox)
Sealed Ruin:Lower Level (Timed-Lowee)
Zephyranthes
Challenge Cave:Evil Nest (Story)
Dis Snow Forest:Monster Forest (Story)
Challenge Cave:Near the Entrance (Timed-Lastation)
Physalis
Hirooi Castle:Basilicom Entrance (Story)
Micro Park:Basilicom Entrance (Story)
Rafflesia
Challenge Cave:Kutegori's Cave (Story)
Convent:Dragon's Nest (Timed-Lowee)
Mars Flytrap
Evil Cave:Closed Sector (Timed-Planeptune)
Venus Flytrap
Evil Cave:Closed Sector (Timed-Planeptune)
Cockatrice
Windy Wasteland:Den by Merchant Way (Story)
Challenge Cave:Ghost Mine (Story)
Sealed Ruin:Lower Level (Timed-Lastation)
Mega Storage 3:Data Storage 1 (Timed-Lastation)
Windy Wasteland:Dark God's Cave (Timed-Lastation)
Bird of Paradise
Maado Forest:Herb Forest (Story)
Maado Forest:Old Trading Way (Story)
Hirool Castle:F1 (Timed-Leanbox)
Stella Mines:Near Entrance (Timed-Leanbox)
Choocoboo *MISSABLE*
Evil Cave:Old Mining Area (Story)
Light Dragon
Story Boss
Queen Yang
King Yin
Timed Dungeon Bosses (Yin-Yang Act-Lowee)
Shiro
Kuro
Timed Dungeon Bosses (Together Forever-Lastation)
Shining Dragon
Timed Dungeon Boss (Golden Dragon-Planeptune)
Dark Dragon
Story Boss
Dark Rage Dragon
Timed Dungeon Boss (Rampaging Dragon-Planpetune)
Dragon King
Timed Dungeon Boss (King of Dragons-Lowee)
Dogoo
Tutorial (Story)
Evil Cave:Cave Near Town (Story)
Sealed Ruin:Lower Level (Timed-Planeptune)
Neo-Geo Front:Sector 1 (Timed-Planeptune)
Norma Tower:Floor 2 (Timed-Planeptune)
Evil Cave:Center (Timed-Planeptune)
Metal Dogoo
Celestial Path:Last Dungeon (Story)
Celestial Path:Hero's Road (Timed-Planeptune)
Pixelvader
Tutorial (Story)
Evil Cave:Cave Near Town (Story)
Evil Cave:Suspicious Cave (Story)
Sealed Ruin:Lower Level (Timed-Planeptune)
Neo-Geo Front:Sector 1 (Timed-Planeptune)
Norma Tower:Floor 2 (Timed-Planeptune)
Evil Cave:Near The Entrance (Timed-Planeptune)
Poxvader
This is the only monster in the game that only appears in a story dungeon but is not missable. It's part of a forced fight the tutorial, the very first dungeon of the game.
Black Heart
Green Heart
White Heart
Neptune
Timed Bosses (The Bell Tolls for a Goddess-Planeptune)
Arfoire
Timed Boss (The Goddess That Leapt Through Time-Planeptune)
Emporer Dragon
King Dragon
Silver King
Gold King
Dark King
Shining King
Shadow King
Timed Dungeon Bosses (Defeat the Seven Dragons-Planeptune)
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